############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS11HS3HS3HS6HS4 FINGERPRINT = 17:23:38:50:65:81:85:98:106:122:124:135:155:165:170 LOOP_LENGTH_SUM = 27 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 155 S1_NAME_ID3 = 162 S1_NUM_ID5_ORIG = 155 S1_NUM_ID3_ORIG = 162 S1_NAME2_ID5 = 156 S1_NAME2_ID3 = 161 S1_NUM2_ID5_ORIG = 156 S1_NUM2_ID3_ORIG = 161 S1_SQ2 = GGAACU S1_SQLEN2 = 6 S1_SQ = GGGAACUC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 43 S2_NAME_ID3 = 46 S2_NUM_ID5_ORIG = 43 S2_NUM_ID3_ORIG = 46 S2_NAME2_ID5 = 44 S2_NAME2_ID3 = 45 S2_NUM2_ID5_ORIG = 44 S2_NUM2_ID3_ORIG = 45 S2_SQ2 = GC S2_SQLEN2 = 2 S2_SQ = AGCC S2_SQLEN = 4 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 188 S3_NAME_ID3 = 202 S3_NUM_ID5_ORIG = 188 S3_NUM_ID3_ORIG = 202 S3_NAME2_ID5 = 189 S3_NAME2_ID3 = 201 S3_NUM2_ID5_ORIG = 189 S3_NUM2_ID3_ORIG = 201 S3_SQ2 = AAGGAGAAGAAAG S3_SQLEN2 = 13 S3_SQ = GAAGGAGAAGAAAGA S3_SQLEN = 15 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 207 S4_NAME_ID3 = 213 S4_NUM_ID5_ORIG = 207 S4_NUM_ID3_ORIG = 213 S4_NAME2_ID5 = 208 S4_NAME2_ID3 = 212 S4_NUM2_ID5_ORIG = 208 S4_NUM2_ID3_ORIG = 212 S4_SQ2 = CGAUU S4_SQLEN2 = 5 S4_SQ = UCGAUUC S4_SQLEN = 7 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 238 S5_NAME_ID3 = 244 S5_NUM_ID5_ORIG = 238 S5_NUM_ID3_ORIG = 244 S5_NAME2_ID5 = 239 S5_NAME2_ID3 = 243 S5_NUM2_ID5_ORIG = 239 S5_NUM2_ID3_ORIG = 243 S5_SQ2 = AUCAG S5_SQLEN2 = 5 S5_SQ = GAUCAGC S5_SQLEN = 7 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 438 S6_NAME_ID3 = 447 S6_NUM_ID5_ORIG = 438 S6_NUM_ID3_ORIG = 447 S6_NAME2_ID5 = 439 S6_NAME2_ID3 = 446 S6_NUM2_ID5_ORIG = 439 S6_NUM2_ID3_ORIG = 446 S6_SQ2 = CUAAAUAC S6_SQLEN2 = 8 S6_SQ = GCUAAAUACU S6_SQLEN = 10 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 156 H1_OUTID2_ORIG = 45 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 188.18705341162527 H1_P_Y = -4.944997553837773 H1_P_Z = 110.56411221515319 # Orientation: H1_DX_X = 0.789568123343372 H1_DX_Y = 0.5306252388268318 H1_DX_Z = 0.308251576670699 H1_DY_X = -0.5535221176080256 H1_DY_Y = 0.39894822820460973 H1_DY_Z = 0.7310633190983822 H1_DZ_X = 0.2649442279400489 H1_DZ_Y = -0.7478483583804776 H1_DZ_Z = 0.6087096097063665 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 189 H2_OUTID2_ORIG = 161 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 180.35153888823368 H2_P_Y = 5.118008465350389 H2_P_Z = 97.2550745813594 # Orientation: H2_DX_X = 0.26661126510956024 H2_DX_Y = -0.9194350842423447 H2_DX_Z = -0.28906324425796015 H2_DY_X = -0.7712026753980012 H2_DY_Y = -0.38339753469761373 H2_DY_Z = 0.5081857572254194 H2_DZ_X = -0.5780699497255171 H2_DZ_Y = 0.08743829968644068 H2_DZ_Z = -0.8112888985881028 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 15 H3_INID2 = 2 H3_OUTID2 = 14 H3_INID2_ORIG = 208 H3_OUTID2_ORIG = 201 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 181.0029624312804 H3_P_Y = -21.943862117001373 H3_P_Z = 68.57016471324405 # Orientation: H3_DX_X = 0.11751032738160916 H3_DX_Y = 0.8624989166890309 H3_DX_Z = 0.49222651459355404 H3_DY_X = 0.7996062949213467 H3_DY_Y = 0.21176169714205173 H3_DY_Z = -0.5619490695300158 H3_DZ_X = -0.5889151858126809 H3_DZ_Y = 0.459622238728457 H3_DZ_Z = -0.6647753767893647 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 2 H4_OUTID2 = 6 H4_INID2_ORIG = 239 H4_OUTID2_ORIG = 212 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 193.5855081551078 H4_P_Y = -8.22573582913552 H4_P_Z = 75.30295522139036 # Orientation: H4_DX_X = -0.11500168119806631 H4_DX_Y = 0.6051241365955331 H4_DX_Z = 0.7877813101560207 H4_DY_X = 0.8964799377391159 H4_DY_Y = 0.40483191333228596 H4_DY_Z = -0.18009676060107438 H4_DZ_X = -0.42789991184025666 H4_DZ_Y = 0.6855187096332536 H4_DZ_Z = -0.5890379989354386 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 7 H5_INID2 = 2 H5_OUTID2 = 6 H5_INID2_ORIG = 439 H5_OUTID2_ORIG = 243 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 184.36818959340795 H5_P_Y = -25.26443831325031 H5_P_Z = 88.86012216387125 # Orientation: H5_DX_X = 0.8567218207820986 H5_DX_Y = -0.2514001104066068 H5_DX_Z = 0.450361750466584 H5_DY_X = -0.4366404704096567 H5_DY_Y = 0.1112636222189245 H5_DY_Z = 0.8927292456121023 H5_DZ_X = -0.2745411105758535 H5_DZ_Y = -0.9614667913444919 H5_DZ_Z = -0.014449489454761988 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 10 H6_INID2 = 2 H6_OUTID2 = 9 H6_INID2_ORIG = 44 H6_OUTID2_ORIG = 446 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 204.56892528475737 H6_P_Y = 5.029279620542438 H6_P_Z = 93.98274824762778 # Orientation: H6_DX_X = -0.7628026569873612 H6_DX_Y = 0.4803496617406733 H6_DX_Z = 0.43289295323280896 H6_DY_X = 0.41322253918315255 H6_DY_Y = -0.1528207990874666 H6_DY_Z = 0.8977153983737338 H6_DZ_X = 0.4973723349805823 H6_DZ_Y = 0.8636608164273127 H6_DZ_Z = -0.08191919533339842 ############# END of Description of junction: j5