############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS7HS7 FINGERPRINT = 37:133:169 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2804 S1_NAME_ID3 = 2816 S1_NUM_ID5_ORIG = 2804 S1_NUM_ID3_ORIG = 2816 S1_NAME2_ID5 = 2806 S1_NAME2_ID3 = 2814 S1_NUM2_ID5_ORIG = 2806 S1_NUM2_ID3_ORIG = 2814 S1_SQ2 = GUUAAGAGG S1_SQLEN2 = 9 S1_SQ = GGGUUAAGAGGCC S1_SQLEN = 13 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2787 S2_NAME_ID3 = 2792 S2_NUM_ID5_ORIG = 2787 S2_NUM_ID3_ORIG = 2792 S2_NAME2_ID5 = 2789 S2_NAME2_ID3 = 2790 S2_NUM2_ID5_ORIG = 2789 S2_NUM2_ID3_ORIG = 2790 S2_SQ2 = UC S2_SQLEN2 = 2 S2_SQ = ACUCCC S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2851 S3_NAME_ID3 = 2863 S3_NUM_ID5_ORIG = 2851 S3_NUM_ID3_ORIG = 2863 S3_NAME2_ID5 = 2853 S3_NAME2_ID3 = 2861 S3_NUM2_ID5_ORIG = 2853 S3_NUM2_ID3_ORIG = 2861 S3_SQ2 = UGCUCAUCA S3_SQLEN2 = 9 S3_SQ = GGUGCUCAUCAGU S3_SQLEN = 13 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2806 H1_OUTID2_ORIG = 2790 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 26.26421645380501 H1_P_Y = 88.83156175695355 H1_P_Z = 152.47587443128864 # Orientation: H1_DX_X = -0.30802947128127656 H1_DX_Y = 0.38103765649529464 H1_DX_Z = 0.8717385784481166 H1_DY_X = 0.7223434493876795 H1_DY_Y = -0.5026401850297759 H1_DY_Z = 0.47494503420918477 H1_DZ_X = 0.6191427831679057 H1_DZ_Y = 0.7759917194956358 H1_DZ_Z = -0.12041206469996268 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 13 H2_INID2 = 3 H2_OUTID2 = 11 H2_INID2_ORIG = 2853 H2_OUTID2_ORIG = 2814 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 36.70724578571181 H2_P_Y = 92.72556409570542 H2_P_Z = 174.76214326121712 # Orientation: H2_DX_X = -0.4767634636247067 H2_DX_Y = -0.1104297981402027 H2_DX_Z = 0.8720675773328992 H2_DY_X = 0.5145744570714612 H2_DY_Y = -0.8393915903747455 H2_DY_Z = 0.17502824382870585 H2_DZ_X = 0.7126778570168923 H2_DZ_Y = 0.5321907718956282 H2_DZ_Z = 0.45701559538701986 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 13 H3_INID2 = 3 H3_OUTID2 = 11 H3_INID2_ORIG = 2789 H3_OUTID2_ORIG = 2861 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 10.73573153143336 H3_P_Y = 76.57707970494766 H3_P_Z = 149.40569660284064 # Orientation: H3_DX_X = -0.2828897210023147 H3_DX_Y = 0.8654189190619803 H3_DX_Z = -0.4135498764125316 H3_DY_X = 0.7421622984066403 H3_DY_Y = -0.07562717225060567 H3_DY_Z = -0.6659396771788977 H3_DZ_X = -0.6075924033223217 H3_DZ_Y = -0.49530861626561773 H3_DZ_Z = -0.6208871443974715 ############# END of Description of junction: j40