############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 6 LILLEY = 2HS3HS1HS3HS4HS19 FINGERPRINT = 41:42:45:68:71:88:103:109:111:127:132:140:144:164:174 LOOP_LENGTH_SUM = 30 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 833 S1_NAME_ID3 = 839 S1_NUM_ID5_ORIG = 833 S1_NUM_ID3_ORIG = 839 S1_NAME2_ID5 = 835 S1_NAME2_ID3 = 837 S1_NUM2_ID5_ORIG = 835 S1_NUM2_ID3_ORIG = 837 S1_SQ2 = CGC S1_SQLEN2 = 3 S1_SQ = AGCGCCU S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 816 S2_NAME_ID3 = 824 S2_NUM_ID5_ORIG = 816 S2_NUM_ID3_ORIG = 824 S2_NAME2_ID5 = 818 S2_NAME2_ID3 = 822 S2_NUM2_ID5_ORIG = 818 S2_NUM2_ID3_ORIG = 822 S2_SQ2 = GAAAG S2_SQLEN2 = 5 S2_SQ = CCGAAAGCU S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 939 S3_NAME_ID3 = 948 S3_NUM_ID5_ORIG = 939 S3_NUM_ID3_ORIG = 948 S3_NAME2_ID5 = 941 S3_NAME2_ID3 = 946 S3_NUM2_ID5_ORIG = 941 S3_NUM2_ID3_ORIG = 946 S3_SQ2 = AGACAC S3_SQLEN2 = 6 S3_SQ = GGAGACACAC S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 969 S4_NAME_ID3 = 993 S4_NUM_ID5_ORIG = 969 S4_NUM_ID3_ORIG = 993 S4_NAME2_ID5 = 971 S4_NAME2_ID3 = 991 S4_NUM2_ID5_ORIG = 971 S4_NUM2_ID3_ORIG = 991 S4_SQ2 = GAAGAGGGAAACAACCCAGAC S4_SQLEN2 = 21 S4_SQ = GUGAAGAGGGAAACAACCCAGACCG S4_SQLEN = 25 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1161 S5_NAME_ID3 = 1166 S5_NUM_ID5_ORIG = 1161 S5_NUM_ID3_ORIG = 1166 S5_NAME2_ID5 = 1163 S5_NAME2_ID3 = 1164 S5_NUM2_ID5_ORIG = 1163 S5_NUM2_ID3_ORIG = 1164 S5_SQ2 = GC S5_SQLEN2 = 2 S5_SQ = CGGCAG S5_SQLEN = 6 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1183 S6_NAME_ID3 = 1191 S6_NUM_ID5_ORIG = 1183 S6_NUM_ID3_ORIG = 1191 S6_NAME2_ID5 = 1185 S6_NAME2_ID3 = 1189 S6_NUM2_ID5_ORIG = 1185 S6_NUM2_ID3_ORIG = 1189 S6_SQ2 = GGGUA S6_SQLEN2 = 5 S6_SQ = UUGGGUAGG S6_SQLEN = 9 S6_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 835 H1_OUTID2_ORIG = 822 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 5.216543532267558 H1_P_Y = -50.73320772311197 H1_P_Z = -17.639030299375165 # Orientation: H1_DX_X = -0.7475555418948705 H1_DX_Y = -0.6449478133451478 H1_DX_Z = -0.15875462148730435 H1_DY_X = 0.2143082989687617 H1_DY_Y = -0.4604455750449148 H1_DY_Z = 0.861430104776165 H1_DZ_X = -0.6286753254068307 H1_DZ_Y = 0.6099444158961234 H1_DZ_Z = 0.4824263101674191 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 3 H2_OUTID2 = 5 H2_INID2_ORIG = 941 H2_OUTID2_ORIG = 837 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 15.760384814343132 H2_P_Y = -70.26364907634489 H2_P_Z = -24.754678825403698 # Orientation: H2_DX_X = 0.6246775880465893 H2_DX_Y = 0.6657581429972765 H2_DX_Z = -0.40809803482143536 H2_DY_X = 0.6753487246456 H2_DY_Y = -0.19824111541112188 H2_DY_Z = 0.710355235273255 H2_DZ_X = 0.3920229726838276 H2_DZ_Y = -0.7193514823737956 H2_DZ_Z = -0.5734556946223144 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 3 H3_OUTID2 = 8 H3_INID2_ORIG = 971 H3_OUTID2_ORIG = 946 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 4.778380957925329 H3_P_Y = -46.958729416905435 H3_P_Z = -38.946980950463754 # Orientation: H3_DX_X = 0.5918126063360374 H3_DX_Y = 0.7763037415670411 H3_DX_Z = -0.21704916450139677 H3_DY_X = 0.02864474164462827 H3_DY_Y = -0.28935037662390073 H3_DY_Z = -0.9567945643259677 H3_DZ_X = -0.8055664576916417 H3_DZ_Y = 0.5600257676005782 H3_DZ_Z = -0.19347822064904818 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 25 H4_INID2 = 3 H4_OUTID2 = 23 H4_INID2_ORIG = 1163 H4_OUTID2_ORIG = 991 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 35.02307823601263 H4_P_Y = -59.06221206502435 H4_P_Z = -57.38076901970473 # Orientation: H4_DX_X = 0.8543148472375321 H4_DX_Y = 0.4330579423409162 H4_DX_Z = 0.2874142661124708 H4_DY_X = 0.46704959406104507 H4_DY_Y = -0.3969924205039419 H4_DY_Z = -0.7901023318215437 H4_DZ_X = -0.2280588048660448 H4_DZ_Y = 0.8092328692273227 H4_DZ_Z = -0.5414160552525118 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 3 H5_OUTID2 = 4 H5_INID2_ORIG = 1185 H5_OUTID2_ORIG = 1164 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 35.21921396980312 H5_P_Y = -73.36379762887255 H5_P_Z = -47.0370428076731 # Orientation: H5_DX_X = 0.13971688729352394 H5_DX_Y = 0.5572309957832857 H5_DX_Z = 0.8185186673151534 H5_DY_X = -0.9824575501911923 H5_DY_Y = -0.025101840831439404 H5_DY_Z = 0.18478923036582984 H5_DZ_X = 0.12351661215129184 H5_DZ_Y = -0.8299780207482854 H5_DZ_Z = 0.5439486479415407 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 9 H6_INID2 = 3 H6_OUTID2 = 7 H6_INID2_ORIG = 818 H6_OUTID2_ORIG = 1189 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 33.687372026146484 H6_P_Y = -57.63768747036918 H6_P_Z = -29.294845264943834 # Orientation: H6_DX_X = -0.7576962163649483 H6_DX_Y = -0.41373708145248855 H6_DX_Z = 0.5046960185472216 H6_DY_X = 0.15846904808307016 H6_DY_Y = -0.8668502560084619 H6_DY_Z = -0.47271364953607886 H6_DZ_X = 0.6330750386059165 H6_DZ_Y = -0.2781946460470621 H6_DZ_Z = 0.7223736805870402 ############# END of Description of junction: j4