RNAJunction Database - Junction Profile:1978
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1978: 1K01_j2_A-G1440_A-C1580

Primary Citation: (from PDB entry 1K01)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1J5A j2 A-G1440 A-C1580 
NC-IUBMB Classification:HS2HS7Cluster Page
Angles: 101°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.05728Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGCCAAGAAAAGC 13nt

Strand 2: Chain A: GGGACGCA 8nt

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