RNAJunction Database - Junction Profile:4680
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4680: 1PNY_j2_0-G1440_0-C1580

Primary Citation: (from PDB entry 1PNY)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1J5A j2 A-G1440 A-C1580 
NC-IUBMB Classification:HS2HS7Cluster Page
Angles: 101°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.94521Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UGCCAAGAAAAGC 13nt

Strand 2: Chain 0: GGGACGCA 8nt

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