RNAJunction Database - Junction Profile:648
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 648: 1HNX_j2_A-C569_A-C866

Primary Citation: (from PDB entry 1HNX)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-C569 A-C866 
NC-IUBMB Classification:2HS14Cluster Page
Angles: 7°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80109Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACGCGUUAAGCGCGCCGC 18nt

Strand 2: Chain A: GCGU 4nt

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